PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0004447.1_g050.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 540aa MW: 62601.9 Da PI: 6.5625

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0004447.1_g050.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.1	1.9e-20	77	160	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 kfYn+YA+ vGFs+r sk +k+ + g+ +r fvCs egkre++k + + +++raetr gC a++k++ + ++k++vt+++ e Pav_sc0004447.1_g050.1.br 77 KFYNAYAYGVGFSIRLSKFHKE-KCGKLRDRLFVCSAEGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPE 158 6***************9998.6677**************99.9999****************************** PP FAR1 85 Hn 86 H+ Pav_sc0004447.1_g050.1.br 159 HS 160 *7 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MNGENNYRDD DGTQASPKLI FETGVDFNAF ADSESNEEKL SETTQGNENI ELIHSNMQKK 60 LIPVIGMEFE TEEEAFKFYN AYAYGVGFSI RLSKFHKEKC GKLRDRLFVC SAEGKREKNK 120 CDGSVKSHRA ETRFGCLARM KISCRLNDKY CVTEFVPEHS YVTSSPCKTH FFRSHRNMSL 180 AQIVEADMAD SSGIAPKTTL ELLSRQAGGR QNLGFILVDY KNYLRSKLDE DDMITNIFWA 240 DARMMVDYDY FGDVVCFDTT YRKNKDERPF AMFVGVNNHR QTVVFGAALL YAETTDTFIW 300 LFDTFVKAMS GKKPISILTD QDAAMAKALL SEWPETCHHL CIWHIYQNAA KHLSNAFEKF 360 KSFTKDFGRC IYDYEDEDDF INAWNNMLEK YNLKDDDWLR RLFNIKEQWA LVYGRQTFCD 420 DITTTQRSES MNSALKKYVS YKYDLLRLFQ HFQRLVEDRR YQELKAEFRA SQSSPALSFP 480 VEILKHASNI YTPEVFKLFQ DELCKAHDCV LKFNGEIGSI SNMKLSLIRS IGTTQSHLTQ

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MNGENNYRDD DGTQASPKLI FETGVDFNAF ADSESNEEKL SETTQGNENI ELIHSNMQKK  60
LIPVIGMEFE TEEEAFKFYN AYAYGVGFSI RLSKFHKEKC GKLRDRLFVC SAEGKREKNK  120
CDGSVKSHRA ETRFGCLARM KISCRLNDKY CVTEFVPEHS YVTSSPCKTH FFRSHRNMSL  180
AQIVEADMAD SSGIAPKTTL ELLSRQAGGR QNLGFILVDY KNYLRSKLDE DDMITNIFWA  240
DARMMVDYDY FGDVVCFDTT YRKNKDERPF AMFVGVNNHR QTVVFGAALL YAETTDTFIW  300
LFDTFVKAMS GKKPISILTD QDAAMAKALL SEWPETCHHL CIWHIYQNAA KHLSNAFEKF  360
KSFTKDFGRC IYDYEDEDDF INAWNNMLEK YNLKDDDWLR RLFNIKEQWA LVYGRQTFCD  420
DITTTQRSES MNSALKKYVS YKYDLLRLFQ HFQRLVEDRR YQELKAEFRA SQSSPALSFP  480
VEILKHASNI YTPEVFKLFQ DELCKAHDCV LKFNGEIGSI SNMKLSLIRS IGTTQSHLTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-103	FAR1 family protein