PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004252.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 114aa    MW: 13550.7 Da    PI: 9.8615
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004252.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.85.2e-10791183
                               EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEE CS
                         B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvv 81
                               f+kvl+ sdv +   lv+    ++     ++ +++ +++ d ++ +++e+kl+ rk+++    ++ ++GW+ Fv++ g+ +gD++ 
  Pav_sc0004252.1_g060.1.mk  7 FEKVLKASDVER---LVVTSAMLAMLpRADPDRDVPIRVFDnQKHKVYEFKLSSRKRGRYekpVFQSRGWRVFVNDRGIAAGDVLY 89
                               778887777775...455555554446444556666666663788*******875555557878888******************9 PP

                               EE CS
                         B3 82 Fk 83
                               F 
  Pav_sc0004252.1_g060.1.mk 90 FW 91
                               95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MELVDRFEKV LKASDVERLV VTSAMLAMLP RADPDRDVPI RVFDNQKHKV YEFKLSSRKR  60
GRYEKPVFQS RGWRVFVNDR GIAAGDVLYF WEEYPIEGTR YRIALYKPDL FPHL