PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0004087.1_g010.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 429aa MW: 49853.2 Da PI: 7.6283

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0004087.1_g010.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	71.2	2.7e-22	3	76	52	127
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 k+++++w+fFs+ + + +++knr+t++g+Wk tg++++++++ +++++g k++L+fy+gr +++ekt+Wvmhey Pav_sc0004087.1_g010.1.br 3 KSDDENWFFFSRPEYN---KQKKNRTTQEGFWKITGREHPIKARdNRSVIGRKRILTFYRGRVRNSEKTNWVMHEYY 76 567889**998764...5799***************9977778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
LLKSDDENWF FFSRPEYNKQ KKNRTTQEGF WKITGREHPI KARDNRSVIG RKRILTFYRG 60 RVRNSEKTNW VMHEYYIPDD NPNAQRDFVL CRLKKNVKNA DVATTCDEGE THNASDVEYQ 120 PVNDMNMEDT RPPENGDYFE RARDLLLANS LSNNDHNAFP PEFSANDQEF LRTLIVEPQF 180 REDTRPPENG DYFERARDLL LANSLSNNDH NAFPPEFSAN DQEFLRTLIV EPQFRVTSDT 240 DREPAHHRVQ SLQMRCEPQI LYKLQCGSSQ SRRDTDVILH NQLSRQASSS VNVASKPQTE 300 VQLQSGTYQR EHRPQQQSGP ISVFRDTSAD EYYTREKTRR ITYPAEKPKE PEKPKPAPEK 360 PKEPPYPLTA AYFPQKQISI TKSSIDKKVP QGSMEQTQNR TTPGNWKGSF ITWQTSPLTS 420 PPSVYIFNT

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

LLKSDDENWF FFSRPEYNKQ KKNRTTQEGF WKITGREHPI KARDNRSVIG RKRILTFYRG  60
RVRNSEKTNW VMHEYYIPDD NPNAQRDFVL CRLKKNVKNA DVATTCDEGE THNASDVEYQ  120
PVNDMNMEDT RPPENGDYFE RARDLLLANS LSNNDHNAFP PEFSANDQEF LRTLIVEPQF  180
REDTRPPENG DYFERARDLL LANSLSNNDH NAFPPEFSAN DQEFLRTLIV EPQFRVTSDT  240
DREPAHHRVQ SLQMRCEPQI LYKLQCGSSQ SRRDTDVILH NQLSRQASSS VNVASKPQTE  300
VQLQSGTYQR EHRPQQQSGP ISVFRDTSAD EYYTREKTRR ITYPAEKPKE PEKPKPAPEK  360
PKEPPYPLTA AYFPQKQISI TKSSIDKKVP QGSMEQTQNR TTPGNWKGSF ITWQTSPLTS  420
PPSVYIFNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	7e-20	NAC family protein