PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003780.1_g060.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 420aa MW: 46243.2 Da PI: 6.5011

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003780.1_g060.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	107.2	8.8e-34	111	171	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s +tkfCy+nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+ss Pav_sc0003780.1_g060.1.mk 111 PDKVLPCPRCNSLKTKFCYFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSS 171 78999****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MSAMRDPAIK LFGRNILVPE RQIPDMSVHN SNEVCWVADM PKAAMGECRE MEDPSVKVSC 60 KQDQFFELDK GSENNHHGQF LENEGEVDCN PEEDCIASDT DDGKEKAFTK PDKVLPCPRC 120 NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS SSQYHQVVGE 180 PSAVPVTQGD TLNFVGQQHL SPVQLPASPK PVNRMREVLN SGTDTVLVES IATALDHKDQ 240 KRSSEDGSAA AGDNSEEPSS SSSSLTATTS QQNACLGKEM EQVDLPRYGN DYNLTYTEQY 300 FPVPQWAENP SWGSMMFGPH SNNPNPSHMG SLPMVTVPGF CIPSFIFPIA PSSYQGYMPS 360 SDARKWNAQL VGSAGSLSPS SSNGNSRCSD NSSPRSGKYS RDANVQAGIK TNSAFGYPSH

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MSAMRDPAIK LFGRNILVPE RQIPDMSVHN SNEVCWVADM PKAAMGECRE MEDPSVKVSC  60
KQDQFFELDK GSENNHHGQF LENEGEVDCN PEEDCIASDT DDGKEKAFTK PDKVLPCPRC  120
NSLKTKFCYF NNYSVYQPRH FCKSCRRYWT AGGTIRNLPL GTRRHRNKHS SSQYHQVVGE  180
PSAVPVTQGD TLNFVGQQHL SPVQLPASPK PVNRMREVLN SGTDTVLVES IATALDHKDQ  240
KRSSEDGSAA AGDNSEEPSS SSSSLTATTS QQNACLGKEM EQVDLPRYGN DYNLTYTEQY  300
FPVPQWAENP SWGSMMFGPH SNNPNPSHMG SLPMVTVPGF CIPSFIFPIA PSSYQGYMPS  360
SDARKWNAQL VGSAGSLSPS SSNGNSRCSD NSSPRSGKYS RDANVQAGIK TNSAFGYPSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	6e-36	Dof family protein