PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003685.1_g150.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 442aa MW: 50140.7 Da PI: 4.7846

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003685.1_g150.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.1	1.8e-32	58	196	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 lp+G++F+Ptd+e++++ L +k +++ ++++ + +++ +i+ ++P++Lp +vk++ + +fF+++ k+y+tg+rk+r Pav_sc0003685.1_g150.1.mk 58 LPKGVKFDPTDQEIIWH-LIAKSGAEElkphpfIDEFIItVDDDeGICCSHPHKLP-SVKQDGNASHFFHRAIKAYNTGTRKRR 139 799**********65.5556555554676554443333444336******.778889999************** PP NAM 77 atk....sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ + +W++tg++k+v+ +g + g+kk++v+y + k++kt+Wvmh+y+l Pav_sc0003685.1_g150.1.mk 140 KIHdgdgDVRWHKTGRTKPVML-DGVQRGCKKIMVLYmsTVGGGKPKKTNWVMHQYHL 196 9883433446********.99********5533555667*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MAGPSWLVDK NRIATKIKSA SGTSDPERIK WQSNPTRACP NCQYTIDNSD VAQEWPGLPK 60 GVKFDPTDQE IIWHLIAKSG AEELKPHPFI DEFIITVDDD EGICCSHPHK LPSVKQDGNA 120 SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPVM LDGVQRGCKK IMVLYMSTVG 180 GGKPKKTNWV MHQYHLGTEE DEKDGEYVIS KIYYQQQQVK QADKTDQDLP ESIDLVITKV 240 DPVTPKSVTP EPPRTERKLA DFDLGQDTPA TSRDPFPQHP EMDHAEDEVH PEMHHAEDEV 300 HPEFEKPDHY DQHNVENEAD EVINNTENNA QEDPKWWDSE SQNLLDSQQL VEGLSLCDDL 360 LQSQSPIRAG HENGEPAQVK PRLADYAKLG PENLKKDLEE CQNIVLDPAN IMLEDTPPDF 420 RLSQLEFGSQ ESFLSWGVKL AD

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MAGPSWLVDK NRIATKIKSA SGTSDPERIK WQSNPTRACP NCQYTIDNSD VAQEWPGLPK  60
GVKFDPTDQE IIWHLIAKSG AEELKPHPFI DEFIITVDDD EGICCSHPHK LPSVKQDGNA  120
SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPVM LDGVQRGCKK IMVLYMSTVG  180
GGKPKKTNWV MHQYHLGTEE DEKDGEYVIS KIYYQQQQVK QADKTDQDLP ESIDLVITKV  240
DPVTPKSVTP EPPRTERKLA DFDLGQDTPA TSRDPFPQHP EMDHAEDEVH PEMHHAEDEV  300
HPEFEKPDHY DQHNVENEAD EVINNTENNA QEDPKWWDSE SQNLLDSQQL VEGLSLCDDL  360
LQSQSPIRAG HENGEPAQVK PRLADYAKLG PENLKKDLEE CQNIVLDPAN IMLEDTPPDF  420
RLSQLEFGSQ ESFLSWGVKL AD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-172	NAC family protein