PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0003261.1_g240.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 296aa MW: 32864.8 Da PI: 7.8076 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.6 | 2.2e-13 | 5 | 82 | 18 | 98 |
--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 18 lpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +p fa++h + +++ l+ ++g +W+vk++y+k+ r ++ GW +Fv++n+L++ D++vF l+++ + ++ v +fr Pav_sc0003261.1_g240.1.mk 5 MPSGFAKRHlvE-HPAG--NAFLRVSDGGTWSVKFKYEKSIAR--FQYGWLGFVRDNNLEVDDVCVFILNEDIKLSFDVVFFR 82 589999999743.3344..69999***********77777655..99*********************988766666666666 PP | |||||||
2 | B3 | 52.2 | 1.1e-16 | 137 | 219 | 5 | 94 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 + ++++ + l+lp kf + ++k +s +++l+ ++gr+W+v l +k++ + ++ GW + v++n+Lk+gD++vF l++++ Pav_sc0003261.1_g240.1.mk 137 M-RPSYINGWSLWLPSKFYKLSPSIK-RSCEVILQVSNGRTWSVGL--NKGR--TKFRCGWMDVVRDNHLKVGDVCVFVLISSK 214 4.4455555569*******7776665.667****************..6666..559***********************9854 PP EE..EE CS B3 89 efelvv 94 + ++++ Pav_sc0003261.1_g240.1.mk 215 S-TPLF 219 4.4544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MNKPMPSGFA KRHLVEHPAG NAFLRVSDGG TWSVKFKYEK SIARFQYGWL GFVRDNNLEV 60 DDVCVFILNE DIKLSFDVVF FRTTEEAVNC PLSPGRHDFP TKKGGGGTSS NRTGKATARD 120 GANAFRSQNP SSFIVSMRPS YINGWSLWLP SKFYKLSPSI KRSCEVILQV SNGRTWSVGL 180 NKGRTKFRCG WMDVVRDNHL KVGDVCVFVL ISSKSTPLFD LVIFRSREGA KCTSDGEQIV 240 PTKEETDNEG GDSSDDSSND SSDDSGDESS DDSGDDSVEI MDKFPPPRKT RVVKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24700.1 | 3e-12 | B3 family protein |