PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0003169.1_g210.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 135aa    MW: 15491.1 Da    PI: 5.7491
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0003169.1_g210.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1332e-1086131147
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                                kfY+eYA  +GFs+r+++  +  + g + +r++vCskegkr+++ ++
  Pav_sc0003169.1_g210.1.br  86 KFYSEYALAIGFSIRRNRLGRG-EGGLVRSRQWVCSKEGKRAKKWTN 131
                                6*****************9998.8899**************998665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MANIRGHSSM ANIRGQSSMA NTEGYFVEGE SVEEKRNDSS LRDFDTTTQE IVEINGHLEY  60
DGLNFHDMSI DDLKGREFAN FEEAEKFYSE YALAIGFSIR RNRLGRGEGG LVRSRQWVCS  120
KEGKRAKKWT NRENL