PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003015.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 466aa MW: 53573.7 Da PI: 9.0676

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003015.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.9	1.7e-23	136	221	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fY +YAk +GF +++s++sk ++e+++ +f C+++gk+++ + + ++r+ +++Cka+l+vkk+kd+kw+v+++ +e Pav_sc0003015.1_g090.1.mk 136 SFYLKYAKLIGFGAAIKTSRRSKASKEFIDVKFGCTRHGKKRDYDAS-----NPRSCFKIDCKATLHVKKMKDHKWVVHNFIKE 214 59*************************************998877.....9*************************** PP FAR1 85 HnHelap 91 HnHel+p Pav_sc0003015.1_g090.1.mk 215 HNHELCP 221 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MALLHPQPNA LSRKPRETHI QEPVTQQPGI EGSVAHRLKL TRLIALGLGL RYPRFLHSIE 60 RRKVAEAGRR KVARDKRRHI IACEEKTNSL SSECDEDVDV YVDENLIDVE EGVDEKDKVL 120 EPYIGMEFVS HEEAKSFYLK YAKLIGFGAA IKTSRRSKAS KEFIDVKFGC TRHGKKRDYD 180 ASNPRSCFKI DCKATLHVKK MKDHKWVVHN FIKEHNHELC PNYAHYLPCH MSISSMDKIL 240 KKFQVEVLGV GGCYALKESE DNMSKTFKVQ DFEKKYEFMV VWDARNSEIY CFCHLFEYMG 300 FLCRHAMSVL QSLGIFHIPS HYILERWTKS VKNIYTINHI PKDLKSKKQR FDELFQEATE 360 LSTEGSISQE SFEIAYLAIK EALKKCAMAN QSLKTPENLT CELHDGENMY DNMHAISVLD 420 PQVSKTKGAP KRIKSGIETK NTRKKKVHKN IGLPNRMEGS CPNAAS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MALLHPQPNA LSRKPRETHI QEPVTQQPGI EGSVAHRLKL TRLIALGLGL RYPRFLHSIE  60
RRKVAEAGRR KVARDKRRHI IACEEKTNSL SSECDEDVDV YVDENLIDVE EGVDEKDKVL  120
EPYIGMEFVS HEEAKSFYLK YAKLIGFGAA IKTSRRSKAS KEFIDVKFGC TRHGKKRDYD  180
ASNPRSCFKI DCKATLHVKK MKDHKWVVHN FIKEHNHELC PNYAHYLPCH MSISSMDKIL  240
KKFQVEVLGV GGCYALKESE DNMSKTFKVQ DFEKKYEFMV VWDARNSEIY CFCHLFEYMG  300
FLCRHAMSVL QSLGIFHIPS HYILERWTKS VKNIYTINHI PKDLKSKKQR FDELFQEATE  360
LSTEGSISQE SFEIAYLAIK EALKKCAMAN QSLKTPENLT CELHDGENMY DNMHAISVLD  420
PQVSKTKGAP KRIKSGIETK NTRKKKVHKN IGLPNRMEGS CPNAAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-41	FAR1 family protein