PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002706.1_g040.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 333aa MW: 35617.2 Da PI: 4.7699

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002706.1_g040.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.9	3.3e-06	18	58	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + C+ +++ + lfC+ ++ +lC +C ++H H+ Pav_sc0002706.1_g040.1.mk 18 KPCDSCKNCAAALFCRADSAFLCLTCDAKIHAAnklatrHE 58 57***977*******************6566666666 PP
2	zf-B_box	27.6	5.9e-09	60	105	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ +++ C+ + lC +C +H+ H++vp+ Pav_sc0002706.1_g040.1.mk 60 VWMCEVCEQAPASVTCKADAAALCVTCDADIHSAnplarrHDRVPV 105 689*****************************66899999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGIQAGGWRA MAGGLVAKPC DSCKNCAAAL FCRADSAFLC LTCDAKIHAA NKLATRHERV 60 WMCEVCEQAP ASVTCKADAA ALCVTCDADI HSANPLARRH DRVPVEPFFD SAESIIVKSA 120 AASSIDSLNF LLPNGAVPSH TKDEENDAAS TWLIPNLNCN SKLQMDIAPD IIKSSELFFP 180 EMDSLLEFDY PNPIHHDISG SGTDSVVPVQ PDPLPPPSLN INRVSAEQNC FDLDFCRSKL 240 SSSFSYPTQS LSQSVSSSSM EVGVVPDGNS MSDISYPFGR NASHNVSDPS AQVSATTANQ 300 VATQLIGSGS LYSRDIRRRS DVLIMILCSI GII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	3e-63	CO-like family protein