PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002659.1_g180.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 149aa MW: 17185 Da PI: 9.8901 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.8 | 3.1e-22 | 31 | 118 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 k+Yn YAk++GF vr ++k+s+ +ge+++++fvC k+g++e++ + ++r+r rtgC akl v k + ++k+ v k+++ Pav_sc0002659.1_g180.1.br 31 KMYNVYAKKAGFGVRCYTTKTSRVTGEVVRKEFVCCKQGHTESKVGR---KKRRRGCVRTGCMAKLAVLKPYeKNKYTVVKFKE 111 68***************************************998766...999999***********999988*********** PP FAR1 84 eHnHela 90 eHnHe++ Pav_sc0002659.1_g180.1.br 112 EHNHEMT 118 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MESELEVTPE VSVEFKPQVG LEFDSLEDVL KMYNVYAKKA GFGVRCYTTK TSRVTGEVVR 60 KEFVCCKQGH TESKVGRKKR RRGCVRTGCM AKLAVLKPYE KNKYTVVKFK EEHNHEMTAY 120 DKVHLLRSHR KLVASIQLHQ NGFNCILNL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 77 | 103 | RKKRRRGCVRTGCMAKLAVLKPYEKNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-14 | FAR1 family protein |