PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002607.1_g160.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 131aa MW: 15381 Da PI: 9.994 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.4 | 4.7e-12 | 21 | 107 | 9 | 94 |
HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 9 dvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr 87 + + ++ l k a h ++++++++ + ++d +gr W+++++ +++s++ yvl+ G k++ n+ ++gD+v+F++++ Pav_sc0002607.1_g160.1.mk 21 SLRLKFCVLLTMKQA--HfpKISETQGFPIAIQDYTGRDWKFQYRCWQNSNSkkmYVLE-GLKDYMILNQWQVGDTVTFHRTE- 100 333334445555555..25788999*******************885555555548888.********************654. PP SEE..EE CS B3 88 sefelvv 94 +e++l + Pav_sc0002607.1_g160.1.mk 101 QEGKLII 107 6666665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
IFFPSDYIFL THLNKQETSL SLRLKFCVLL TMKQAHFPKI SETQGFPIAI QDYTGRDWKF 60 QYRCWQNSNS KKMYVLEGLK DYMILNQWQV GDTVTFHRTE QEGKLIIGTK KMPASIASIQ 120 ALKEKIWKLL G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32010.1 | 2e-24 | B3 family protein |