PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002479.1_g670.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ARR-B | ||||||||
Protein Properties | Length: 616aa MW: 69070.3 Da PI: 5.9964 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 76 | 4.9e-24 | 199 | 252 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH++Fv+av+q+ G +k Pk+il+lm+v+ Lt+e+v+SHLQkYRl Pav_sc0002479.1_g670.1.mk 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252 68*******************.9*******************************8 PP | |||||||
2 | Myb_DNA-binding | 39.4 | 1.4e-12 | 201 | 251 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + +k+I m+ +t++++ s++qky+ Pav_sc0002479.1_g670.1.mk 201 RVVWSVDLHQKFVKAVHQIGFDkvGPKKILDLMNvPWLTRENVASHLQKYR 251 678***********************************************7 PP | |||||||
3 | Response_reg | 81.8 | 2.1e-27 | 19 | 127 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82 vl+vdD+p+ +++l+++l+k y +v+++ ++eal+ll+ek+ +D+++ D++mp+mdG++ll++ e +lp+i+++ ge Pav_sc0002479.1_g670.1.mk 19 VLVVDDDPTWLKILEKMLKKCSY-DVTTCGLAREALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGE 100 89*********************.***************999999**********************6644.8*********** PP HHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 83 eedalealkaGakdflsKpfdpeelvk 109 + + + ++ Ga d+l Kp+ ++el++ Pav_sc0002479.1_g670.1.mk 101 TSRVMKGVQHGACDYLLKPIRMKELRN 127 ************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 616 aa Download sequence |
MESSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YDVTTCGLAR EALNLLREKK 60 DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI 120 RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK 180 DVDNKYDDKD FSDCSSTKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR 240 ENVASHLQKY RLYLSRLQKE NDIKSSFGGT KHSDYSSKDL QGILSVQNSI NIQQNDVAHG 300 SYRFSGNNLV AQNADPKSNE GDIKGIDSEP VAEPKKGTTG NIPDSQKTRS SQMDFSSSYT 360 ETKKGLVGNV PHSQKIRSSQ MCVNHSFASV ESEVNFTAFD STIPATYSWN QIQLEKEPKP 420 LIQLNNGFSK PPLPGPHHHF QVDQLQSIPS ISSRPSIPGG DVTGSSKSKP SYSEYTNHHG 480 SRVSPTISPT ISATDSFPGQ TKSCVVDHQV SETISTSTSN MKNQGINLST DLESAQRNLI 540 LGSTSPFASL DDEFQICWYQ GDCYGMNLEL QNIEFSEYTD PTHVTEVPAH LYDALRFEYP 600 CDPSEYCVLD QGLFIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 1e-137 | ARR-B family protein |