PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002375.1_g110.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | BES1 | ||||||||
Protein Properties | Length: 299aa MW: 32798.7 Da PI: 9.605 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 169 | 2.7e-52 | 12 | 142 | 2 | 134 |
DUF822 2 gsgrkptwkErEnnkrRERrR.....RaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeae 80 ++rkp+w+ErEnn+rRERrR Raiaaki+aGLRaqGn++lpk++DnneVlkALc +AGw+vedDGttyrkg kp+ + + Pav_sc0002375.1_g110.1.mk 12 VARRKPSWRERENNRRRERRRrersrRAIAAKIFAGLRAQGNFNLPKHCDNNEVLKALCLQAGWTVEDDGTTYRKGLKPT-QID 94 589************999986333337*****************************************************.9** PP DUF822 81 aagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..a 134 + g+s+ +sp ssl+ +sp++sy+asp+sss+psps++d +++s+ + Pav_sc0002375.1_g110.1.mk 95 TPGTSTMISPYSSLN--------PSPIPSYQASPSSSSYPSPSRFDPSTNSSNpsH 142 *************99........***********************9988766431 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MTSDGATSAA TVARRKPSWR ERENNRRRER RRRERSRRAI AAKIFAGLRA QGNFNLPKHC 60 DNNEVLKALC LQAGWTVEDD GTTYRKGLKP TQIDTPGTST MISPYSSLNP SPIPSYQASP 120 SSSSYPSPSR FDPSTNSSNP SHYLRSAIPS SLPPLRISNS APVTPPLSSP TSRNPNPIPN 180 WDSIAKQSMA SFDYPFYAVS APASPTRHQL HFPAATIPEC DESDTSTVDS GQWVCFQRFA 240 PSLSAMPASP TFNLMKPVVA HQNLPDSEIP EVKPWIGEKI HEVGLDDLEL TLGSGKPRS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 33 | RRKPSWRERENNRRRERRRR |
2 | 27 | 34 | RRERRRRE |
3 | 29 | 34 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75080.2 | 1e-102 | BES1 family protein |