PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002375.1_g060.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 382aa MW: 42536.6 Da PI: 7.1238

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002375.1_g060.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	64	4.5e-20	12	117	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 + F+ tdeel L k ++g++l+ +vi++++ y++eP++Lp + wyf +++++k t+ gyW+++g+ Pav_sc0002375.1_g060.1.mk 12 IGFQCTDEELC-ISLGKIISGSPLPG-NVIEDANPYQLEPSNLP------DGFWYFIHSNENK---------PTNFGYWRTKGE 78 6799****9.66*******9.99**********9......3568888887654.........4778**** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++s +++ +g + tL fy+g+ap+ +ktdWvm+ey l Pav_sc0002375.1_g060.1.mk 79 ACRIFS-NSSITGWRATLEFYQGQAPHESKTDWVMQEYWL 117 **.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 382 aa Download sequence
MCPQSTALPA EIGFQCTDEE LCISLGKIIS GSPLPGNVIE DANPYQLEPS NLPDGFWYFI 60 HSNENKPTNF GYWRTKGEAC RIFSNSSITG WRATLEFYQG QAPHESKTDW VMQEYWLIQK 120 KLSEDSKAKE PRSLCRVFCS NEQKLNCKNL QKMVSSDSAS YSTHSAVPRS ENCTGHSSTS 180 KPQVSKDNER RTLIVTERVP DHNVQLMHEI DYVSRGDYLE LLDLDTPASF SFSSDSSCLT 240 MSSDECFDSL ALLEELEPKN GQDLVNKNAG CKFSISAPQR PDELVMFAAS SGSFSKSPSE 300 ERVKTLSPIP GSAVCGKNSG KTSNNMSRIQ KPVYRNEGGP STSHNVDVSP SSHTASQEGK 360 RRARNVGRPK KLKKQYFCFM PF

Sequence ? help Back to Top

Protein Sequence Length: 382 aa Download sequence

MCPQSTALPA EIGFQCTDEE LCISLGKIIS GSPLPGNVIE DANPYQLEPS NLPDGFWYFI  60
HSNENKPTNF GYWRTKGEAC RIFSNSSITG WRATLEFYQG QAPHESKTDW VMQEYWLIQK  120
KLSEDSKAKE PRSLCRVFCS NEQKLNCKNL QKMVSSDSAS YSTHSAVPRS ENCTGHSSTS  180
KPQVSKDNER RTLIVTERVP DHNVQLMHEI DYVSRGDYLE LLDLDTPASF SFSSDSSCLT  240
MSSDECFDSL ALLEELEPKN GQDLVNKNAG CKFSISAPQR PDELVMFAAS SGSFSKSPSE  300
ERVKTLSPIP GSAVCGKNSG KTSNNMSRIQ KPVYRNEGGP STSHNVDVSP SSHTASQEGK  360
RRARNVGRPK KLKKQYFCFM PF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-21	NAC family protein