PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002286.1_g120.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 97aa MW: 10888.3 Da PI: 10.0693 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28 | 5e-09 | 11 | 54 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT+ +l+ +a + + ++ +W+ +a+ +g g++ +++k ++ Pav_sc0002286.1_g120.1.br 11 SWTPKQNKLFEKALAVYDKDtqdRWHNVAKAVG-GKSVEEVKRHY 54 7********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MASLSSSRNS SWTPKQNKLF EKALAVYDKD TQDRWHNVAK AVGGKSVEEV KRHYEILVQD 60 LMHIESGQVP IPNYKGSGSS SSRGIGDEQR LMKNLKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 7e-43 | MYB_related family protein |