PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002208.1_g240.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 263aa    MW: 29034.6 Da    PI: 6.9997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002208.1_g240.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-194291255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  Pav_sc0002208.1_g240.1.mk 42 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAALAYDAAARKLYG 91
                               69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MLKSEMTSVK VGERKQVKRP AQASSRKGCM RGKGGPENAM CTYKGVRQRT WGKWVAEIRE  60
PNRGARLWLG TFDTSHEAAL AYDAAARKLY GSEAKLNLPD QLVPQYHHHH HHQVPSSANP  120
HMLPQTPNPS AQLALLHQNP SGTSSACLSN DYAAPLNDVE VPVLRGHYPN VKAHQPHGTY  180
PEPKPEAEHS KMKAEENMSG NEGMDSGIFW GNLSGNFPMF DDSIWAEAAM SLDFPVIEDL  240
GIFSSNFVDG SGWEPLQPSP WCV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-43ERF family protein