PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002207.1_g650.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 212aa MW: 23989.9 Da PI: 4.0329 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 31.1 | 7e-10 | 26 | 66 | 1 | 42 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv 42 lp G++F Ptdeel+ +yLkkk++++ l++ + + evdiyk Pav_sc0002207.1_g650.1.mk 26 LPIGYQFVPTDEELIEDYLKKKIKNELLPI-NRFCEVDIYKN 66 699************************999.67999999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEESNIQVAN EIFDEAWLTN KYINDLPIGY QFVPTDEELI EDYLKKKIKN ELLPINRFCE 60 VDIYKNKRVK KKKNEEIADS VQSAHQDDHQ EYPSPLIANS NSSSSSLNHH YTSAGMSSGS 120 TTVNTEFGEP PYYIESFQNG ALSNYPWPIT SFNNDQTLDP ADTTHGLPMN TFSSPFSTDL 180 EPTNDTALAD PSTFSQFPHD DAEEDDNNSF DQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-07 | NAC family protein |