PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002207.1_g640.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 345aa    MW: 39471.2 Da    PI: 4.748
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002207.1_g640.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM348.7e-113280150
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                               lp G+rF Ptd elv+ yL+ kv +k+++  + + ++di  ++P+dL  +
  Pav_sc0002207.1_g640.1.mk 32 LPCGYRFAPTDVELVSSYLEGKVLNKEIPK-NRFLDLDISLYHPRDLTGN 80
                               699*************************99.67999***********843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEENNQFIND PIPDQVDLFI NDPINDAYFN SLPCGYRFAP TDVELVSSYL EGKVLNKEIP  60
KNRFLDLDIS LYHPRDLTGN HQDSKRTEWK MHEYTLDTKT APPNQISNTR VTQLDNCVLC  120
KIYKNTKGAN NDSSTTQSDQ RAEPATNVVA SQAFPDQQIQ PVHRHDQYLV GQSSGASSSS  180
TANKRPRGMP TPTILNTYIG NPTYYPHQQY PFQNQTSGNP PGPVYNNYHQ NDQNDQNLTQ  240
YDQNDQNDQN LTQYDMQSAN IESQVQPRES FSSEPGFLPP METSTYADEM PLVDSSSMQL  300
PVHVRLYEQL LAARNKDGDF DKRLEHWYQH QQQLFRPNPS TTPNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.17e-07NAC family protein