PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002176.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 291aa    MW: 32134.2 Da    PI: 4.2991
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002176.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.11.2e-171766151
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51
                               lppGfrF+Ptd elv++yLk+kv gk+l++ ++i+evdi+k+ PwdLp+k 
  Pav_sc0002176.1_g110.1.mk 17 LPPGFRFSPTDVELVQYYLKRKVMGKRLHF-NFIAEVDIHKYAPWDLPEKS 66
                               79**************************99.99**************9432 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MIVETLHLDF VMRKAPLPPG FRFSPTDVEL VQYYLKRKVM GKRLHFNFIA EVDIHKYAPW  60
DLPEKSCWQG DLKCFLMLQD SYVICMIFQK DGPGPRNGAE YGAPFKEEEW TDDEAEICSE  120
AVPHANMPEP NLVVPSNFNS SIITSTHSPE GIHIGPSSES CISDALPPSC NVLQLVSSNH  180
VTMEKPHVSN DDILSMLNCF TEGSTSLMKE NDKNEELGNA IPSGNASATP HVNSDDIYED  240
LGDLGKLATV SEDGYNFSAV HNSICAPAQM LLGDNGQFLE LDDLGRSVEL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.32e-21NAC family protein