PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001992.1_g050.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 524aa MW: 60787.4 Da PI: 9.2826 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 68.3 | 1.9e-21 | 42 | 130 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+YA +GF +r ++s + + ++ei +++fvC k+g ++++++ +++r+r +r++Ckak++v k++ ++k+ ++ + + Pav_sc0001992.1_g050.1.br 42 NFYNRYAFLAGFGIRLHSSFRGTYKKEILRKEFVCCKQGAYRKDETR--ERKRQRGISRCNCKAKIVVVKTNgSKKYAISLFAE 123 6**************************************99998877..9999*************9999998*********** PP FAR1 84 eHnHela 90 HnH+++ Pav_sc0001992.1_g050.1.br 124 GHNHKMT 130 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence |
MSGGSESDDC VTANGMVYIP EVRNEETPTV GMKFDSLDLA YNFYNRYAFL AGFGIRLHSS 60 FRGTYKKEIL RKEFVCCKQG AYRKDETRER KRQRGISRCN CKAKIVVVKT NGSKKYAISL 120 FAEGHNHKMT DSERVHLLRS HRRISDSTKV LTKQLGSVNI PIHQKVSIFE VQSGGMDKID 180 FIKKDIYNLE CSVNGKLRNH DVELVTEYFM AEQKKKNEAF YFKIEGDGED KFSRCFWADA 240 TSRRAYRLYG DVVVFDTTFN TNRYDLKFAP ILGVNNHGQK IVLACTFLSK ETTESFIWMF 300 EEFKKAMQGG EPKTIITDQD AAITRAISIA FPTTFHRLCI WHITSKFHVK LPHSAYKEYW 360 REFQKAIWDT DNKDEFDAKW NIVVTKAGFT DHQWLSSMFD LRESWVPAYA RDFFAAGMSS 420 SQRAEGSHAF FKQYISRRNS LMDFIIRFER ALSHQRQKEL AADHVDAFEV AQCILPMPMN 480 KQMATLYTRA MFQKFEKELI QRTACFLELK TEDASKVVFN KGPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-98 | FAR1 family protein |