PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001987.1_g090.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 306aa    MW: 33725.4 Da    PI: 4.0287
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001987.1_g090.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.32.3e-17654150
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                               l+pGfrF+Ptd elv++yLk+k+ gk+l + +vi+evdiyk++PwdLp +
  Pav_sc0001987.1_g090.1.mk  6 LAPGFRFKPTDVELVQYYLKRKLLGKRLGF-KVIAEVDIYKYDPWDLPVS 54
                               579************************999.99**************932 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGKSSLAPGF RFKPTDVELV QYYLKRKLLG KRLGFKVIAE VDIYKYDPWD LPVSYCVLFF  60
LSRQILLGLW RSEMDSYVLC MIFQKEGLGP RIGAQYGAPF KEEDWSDDEV EISSEAVQVA  120
ITPEPDLGLP CNYISPTATN AHSVGDIGIG PSGSGICDIL PPFCEVSQPV SSNYVTLEMP  180
HASVGDDIIS MFDCFTEESA LYIDEPKKIE AEGRLETVQN ANMPSTHSPE VIGVGPSFES  240
CGFDVLPPCN VIESVSCNFV TMENPPASNG DETLPIMDCF AEESTFLVNN NGKNEVCNAL  300
FPFLYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.39e-22NAC family protein