PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001971.1_g010.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 272aa MW: 31241.1 Da PI: 8.3511

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001971.1_g010.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.8	4.1e-24	55	141	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YAkevGFsvr+++s+k+k+++ei ++++vCskeg +++ + ++r+r tr g kakl v k+k+g+++v+ +++ Pav_sc0001971.1_g010.1.br 55 EFYNNYAKEVGFSVRINSSRKNKETNEILRKEYVCSKEGVPAKGVGE---KKRRRGITREGLKAKLAVVKSKSGTYVVSLFVEG 135 6***************************************98877...9999************************** PP FAR1 85 HnHela 90 HnH+l Pav_sc0001971.1_g010.1.br 136 HNHPLK 141 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MDYMAQELDG HSEGVGQYRL NSYYDSCDKI YIPQLRDDHK PKSGQGFESL DDAHEFYNNY 60 AKEVGFSVRI NSSRKNKETN EILRKEYVCS KEGVPAKGVG EKKRRRGITR EGLKAKLAVV 120 KSKSGTYVVS LFVEGHNHPL KSPKRVHLLR SHRTVSNSHK CITQLFSAAN IPTHQQFSLL 180 EMQVGEIENV GCLEKNIYNN ERNLCNGLKG HDADMLYEHF QLEHKKNPSF TFKIEADEED 240 RITPCFWADT KSRKAYTFFG DVVLFDSTYN TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-41	FAR1 family protein