PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001938.1_g500.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 160aa MW: 18062.3 Da PI: 8.742 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36 | 1.6e-11 | 14 | 54 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd++l+++++++G g+W+++++ +++k+ w++ Pav_sc0001938.1_g500.1.mk 14 KGLWSPEEDDKLLNYITKHGHGCWSSVPKLAD-----NEIKNLWNS 54 678************************99999.....999998875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MGRHSCCYKQ KLRKGLWSPE EDDKLLNYIT KHGHGCWSSV PKLADNEIKN LWNSCIKKKL 60 RQRGIDPNTH KPLSEVLDQD DKEISKLSPT YKSNEKASVG SNELNLAEAV KPETSQFLSN 120 SSSATTTTST WHHQNQQAFQ ASEMCTKDLQ RLAVAFGQTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G57560.1 | 1e-32 | MYB family protein |