PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001900.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WOX

Protein Properties

Length: 364aa MW: 39756 Da PI: 7.2735

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001900.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.8	1.4e-06	50	68	39	57
S-HHHHHHHHHHHHHHHHC CS Homeobox 39 LterqVkvWFqNrRakekk 57 + +++V++WFqNr+ + k+ Pav_sc0001900.1_g270.1.mk 50 VGDANVFYWFQNRKSRSKH 68 6789************995 PP
2	Wus_type_Homeobox	43	1.1e-14	45	69	40	64
Wus_type_Homeobox 40 eeyGkiedkNVfyWFQNrkaRerqk 64 +eyG+++d+NVfyWFQNrk+R+++k Pav_sc0001900.1_g270.1.mk 45 SEYGQVGDANVFYWFQNRKSRSKHK 69 69*********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSYSSEYGQV GDANVFYWFQ 60 NRKSRSKHKL RHLHNSSKQQ THPHTHLPLT TPVSTSTLNI INAAAPSSSS SSSEKSSPKS 120 APNNKAFSMG FSNAAHDVSI NSPTASVNQQ SSFFQPHQQH HSEVLPEPFF FPMHPNPNCS 180 FTQGFCFSEL SNVVDVPNHG THEQTNNTGP CTSLLLSEIM SHGAAMSRKE YHQEDEMKAM 240 NMKNMDPHHL NYSLNVTTTS PTSHTNMVAS HTTGPTTSVA VPSPMIHNIQ GGVGEAGAMG 300 AGGAEKSTVF INDVAFEVGA GPFNLREAFG DDAVLIHSSG HPVLTNEWGL TLHSLHHGAF 360 YYLI

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MASSNRHWPS MFKSKPANCS THHQWQHDIN PSLVSNGCHR PSYSSEYGQV GDANVFYWFQ  60
NRKSRSKHKL RHLHNSSKQQ THPHTHLPLT TPVSTSTLNI INAAAPSSSS SSSEKSSPKS  120
APNNKAFSMG FSNAAHDVSI NSPTASVNQQ SSFFQPHQQH HSEVLPEPFF FPMHPNPNCS  180
FTQGFCFSEL SNVVDVPNHG THEQTNNTGP CTSLLLSEIM SHGAAMSRKE YHQEDEMKAM  240
NMKNMDPHHL NYSLNVTTTS PTSHTNMVAS HTTGPTTSVA VPSPMIHNIQ GGVGEAGAMG  300
AGGAEKSTVF INDVAFEVGA GPFNLREAFG DDAVLIHSSG HPVLTNEWGL TLHSLHHGAF  360
YYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-24	WOX family protein