PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001883.1_g130.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 171aa MW: 20071.5 Da PI: 7.0453 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 51.7 | 2.9e-16 | 84 | 171 | 1 | 87 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +fY +YA + Fs+r+s+ ++s + g ++ r++ Cskeg+r+++ ++ ++ r++r+etr C+ + vk ++ + v+k++ Pav_sc0001883.1_g130.1.br 84 RFYWNYALAISFSIRRSHLRRS-EGGVVMGRQWACSKEGSRSKKWTNkEDMVRTPRKETRKYCHIAFAVKYCPkRDAYIVNKFV 166 59*******************9.8999***************9988734566789*****************999********* PP FAR1 83 leHnH 87 eH+H Pav_sc0001883.1_g130.1.br 167 MEHSH 171 ****9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MDVEARTKSG IQGQNLIPNS EGYFAEAESL EETENVPSLQ FLDGRIEEIT EISRHFEYDR 60 LNFPNMSIAD LEGREFANFE EAERFYWNYA LAISFSIRRS HLRRSEGGVV MGRQWACSKE 120 GSRSKKWTNK EDMVRTPRKE TRKYCHIAFA VKYCPKRDAY IVNKFVMEHS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 5e-09 | FAR1 family protein |