PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001825.1_g250.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 292aa    MW: 33829.1 Da    PI: 6.2625
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001825.1_g250.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.35.2e-5291331128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                                lppGfrFhPtdeelv++yL++k++g++l +  +ike+d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ +gyWk
  Pav_sc0001825.1_g250.1.mk   9 LPPGFRFHPTDEELVNYYLCRKCAGQSLAV-PIIKEIDLYKFDPWQLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWK 91 
                                79*************************999.88***************6666689***************************** PP

                        NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                atg dk++ +   ++ g+kk Lvfy g+apkg+kt+W+mheyrl
  Pav_sc0001825.1_g250.1.mk  92 ATGADKHIGK--PKALGIKKALVFYAGKAPKGVKTNWIMHEYRL 133
                                ********98..778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MERGGELELP PGFRFHPTDE ELVNYYLCRK CAGQSLAVPI IKEIDLYKFD PWQLPDMALY  60
GEKEWYFFSP RDRKYPNGSR PNRAAGTGYW KATGADKHIG KPKALGIKKA LVFYAGKAPK  120
GVKTNWIMHE YRLANVDRSA SKKNNNNLRL DDWVLCRIYN KKGSIEKQNV TMERSKMTEY  180
PEISHEQKPE MTKMPPPHTD MSSMDSAPRV QQTTDYSSCS EHVLSPEVTW EKEVQSELQW  240
SSDELENSFN TLDNQFINYM DGFSDILDPF GAAQPQYQMD QQNMFAYLQT QF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-117NAC family protein