PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001801.1_g600.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 192aa MW: 21492.8 Da PI: 7.368 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.4 | 7.8e-09 | 42 | 73 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 rg W + Ed +l+++v+q+G +W +Ia++++ Pav_sc0001801.1_g600.1.mk 42 RGHWRPAEDSKLKELVAQHGLQNWILIAEHLN 73 899***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MLSNLDVGGR VPKTNPRALM KVGALVLLGE LVVVGIQRSC GRGHWRPAED SKLKELVAQH 60 GLQNWILIAE HLNPAEDSKL KELDSKLKEL VAQHGLQNWI LIAEQLNPAE VSKLKELVAQ 120 HGLQNWILIV EQLNPAEVSK LKELVAQHGL QNWNLIVEHL DGRGTCNSVD YYHHSKPNNP 180 SPFHLPYTTP FT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 9e-12 | MYB family protein |