PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001794.1_g370.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 653aa MW: 72409.2 Da PI: 7.2005

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001794.1_g370.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.2e-09	445	482	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + Pav_sc0001794.1_g370.1.mk 445 FEHflHPYPTDSDKLMLAKQTGLSRSQVSNWFINARVR 482 554459******************************88 PP
2	BELL	108.7	3.6e-35	314	382	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kk++L+s+l+eV++rYkqy++q+q+v+ sFe vaglg+a+pY++lA ka++rhF+cLk+ai++q+ Pav_sc0001794.1_g370.1.mk 314 ESRRKKSRLISMLDEVYRRYKQYYQQMQAVVTSFEYVAGLGNAAPYANLAIKAMTRHFKCLKNAITDQL 382 7899**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MAEGFEPYHV PQQSRREKLR VLAGQAHPGC LQPDSPPPPH HHLHPGNCAA AGFLPLPYDP 60 SSSFISSSDL LTCEPTPASP VKPEGQVHHH HHHHHPLMGF VSNSSSSSSA STFRNHLNYL 120 DPQPSSINFP INPTSIHDIN ANPFLYPPQN LQALRDFDHQ ADYGHDQVVV FKPEPLSLSL 180 SSSQPPHHHT QQNNNNNNNN NLQRYGASAF NYSSSLNSGV NVASASNENI GSRSSVPLGP 240 FTGYASILKG SRFLKPAQQL LEEFCDVGNR EIYTAKVLAD SSSFFDPPSI ESFSPSHVVD 300 DDDDPLSVGG DGGESRRKKS RLISMLDEVY RRYKQYYQQM QAVVTSFEYV AGLGNAAPYA 360 NLAIKAMTRH FKCLKNAITD QLQFRNRDAT QLSHGKDESQ MLRNTRGFYN QRSIHNSDFV 420 EHQPVWRPQR GLPERAVTVL RAWLFEHFLH PYPTDSDKLM LAKQTGLSRS QVSNWFINAR 480 VRLWKPMVEE IHTLETRQAQ KTSQRGDQSA NRSIDDHLPS PNSLASENPS TTTHRVQDSL 540 SKRTRNELPD HITMGSSTDQ LNLSCNNLPS HMHVGHVGMN MAGGSSSGVS LTLGLHQNNG 600 IGLSEPFPIN AAQRFGLGLD GNNDGYAMGG FESQNRHFGR DVMGGQLLHD FVG

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MAEGFEPYHV PQQSRREKLR VLAGQAHPGC LQPDSPPPPH HHLHPGNCAA AGFLPLPYDP  60
SSSFISSSDL LTCEPTPASP VKPEGQVHHH HHHHHPLMGF VSNSSSSSSA STFRNHLNYL  120
DPQPSSINFP INPTSIHDIN ANPFLYPPQN LQALRDFDHQ ADYGHDQVVV FKPEPLSLSL  180
SSSQPPHHHT QQNNNNNNNN NLQRYGASAF NYSSSLNSGV NVASASNENI GSRSSVPLGP  240
FTGYASILKG SRFLKPAQQL LEEFCDVGNR EIYTAKVLAD SSSFFDPPSI ESFSPSHVVD  300
DDDDPLSVGG DGGESRRKKS RLISMLDEVY RRYKQYYQQM QAVVTSFEYV AGLGNAAPYA  360
NLAIKAMTRH FKCLKNAITD QLQFRNRDAT QLSHGKDESQ MLRNTRGFYN QRSIHNSDFV  420
EHQPVWRPQR GLPERAVTVL RAWLFEHFLH PYPTDSDKLM LAKQTGLSRS QVSNWFINAR  480
VRLWKPMVEE IHTLETRQAQ KTSQRGDQSA NRSIDDHLPS PNSLASENPS TTTHRVQDSL  540
SKRTRNELPD HITMGSSTDQ LNLSCNNLPS HMHVGHVGMN MAGGSSSGVS LTLGLHQNNG  600
IGLSEPFPIN AAQRFGLGLD GNNDGYAMGG FESQNRHFGR DVMGGQLLHD FVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	1e-91	TALE family protein