PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001673.1_g130.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARR-B

Protein Properties

Length: 1160aa MW: 131053 Da PI: 6.3439

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001673.1_g130.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.5	1.5e-23	788	841	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l+Wt+eLH++F++av+ L G + A Pk+il++m+v+gL e+v SHLQkYRl Pav_sc0001673.1_g130.1.mk 788 KPKLVWTNELHKSFLQAVRLL-GVDSAHPKNILQHMNVPGLRKENVSSHLQKYRL 841 79*****************.******************************8 PP
2	Myb_DNA-binding	34.5	4.7e-11	790	840	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT e+++ +++av++lG + ++k I ++m+ g+ +++ s++qky+ Pav_sc0001673.1_g130.1.mk 790 KLVWTNELHKSFLQAVRLLGVDsaHPKNILQHMNvPGLRKENVSSHLQKYR 840 679***********************************************7 PP
3	Response_reg	49.9	1.7e-17	606	713	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82 vl+vd + + + +l ++l + gy +v +a+ + +al ++++k+ +l+l+ +p+md +ell+++++ + k+p++++++ ++ Pav_sc0001673.1_g130.1.mk 606 VLVVDGDSACLAILSRMLCNLGY-KVMTAKRAYDALSIAQKKEdeLHLVLTESHLPDMDKYELLEKMKAVS-KVPVVIMSDDDD 687 89*******************.***********888889*******************999.******** PP HHHHHHHHHTTESEEEESS--HHHHH CS Response_reg 83 eedalealkaGakdflsKpfdpeelv 108 e+ +l l Ga +++Kp ++ l Pav_sc0001673.1_g130.1.mk 688 ENAMLGGLFKGAVFYFVKPLTINSLK 713 ******************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 1160 aa Download sequence
MGVGGKFWDL LKPYARHEGF DFLRNKRVAV DLSFWIVQHE TAIKDRARSP HLRVTFFRTI 60 NLFSKFGAFP VFVVDGSPSP LKSEARIARF FRSSGIDSSS LPVAGDVKAK GEAEALCAQL 120 DAEGHVDACI TSDSDVFLFG AKCVIKTFQS NSREPFECYY MSDIEAGLGL KRKHLIAISL 180 LVGNDYDLNG VQGVGLDTAL RFAQTFSEDV ILNRLREIGN GDASLLQGEI RSVDDSVPSP 240 DESSLKRKFS HCSFCGHPGS KRTHFKSSCE YCSSTMGEGC MKKSEGFKCS CSSCDMDRKE 300 KEQKKQDNWR LKVLSKIALE PNFPNDAIIE MYLCNSHGYF TENDGLHISW GSPKTEMVVD 360 FLAYHQLWEP SYIRQRMLPM LSTIFLREMA KDPVKSLLYG QYEFDSIDRL KIRYGHQFYV 420 VKWKKSAPSL GCVSCTVPPE ESDMQQDDVM EVDESINPFD ESDVPTIDIN NGCCLLLTDE 480 NMDLVHAAFP EEVDRFLQEK ELKELKRRKT GKPETAGSRG VQLNITEFYR SAKVYETEPG 540 EILTKKTEPG EILSSQRAET SKEKRKPSSS NLPKSKLFEK LWMLKAIANL SDLLIFSSPR 600 LEPVSVLVVD GDSACLAILS RMLCNLGYKV MTAKRAYDAL SIAQKKEDEL HLVLTESHLP 660 DMDKYELLEK MKAVSKVPVV IMSDDDDENA MLGGLFKGAV FYFVKPLTIN SLKNLWQFAI 720 IKNRNHVVID LTEEESSVYG ESQQENTSNE GLESESFMTR DRWLRRKNPE GTYKDEETEN 780 SDSTSQKKPK LVWTNELHKS FLQAVRLLGV DSAHPKNILQ HMNVPGLRKE NVSSHLQKYR 840 LSLKREQEAI MKARARGPKK SNFPSHQSSS TLNFRGGCSQ TPNRYSTSTA YQPKRRSHVQ 900 DLSSHMSRPS PAGSVCFPSQ VYSSGHPTLS NESSFPSMPY HSNYKNGQPT LSNQLYYTNY 960 HNPNHIGNRI TSNKELAGFR QVGSFVRYSN FDGNKNFSSF GDHGHSNLVD FPILLHNSTQ 1020 QEVQQQQQLQ PQVLFSPPLQ MPSPPPQPQE QQENDILGQE RQLQPQFLPS SPLQMPSPSP 1080 LPAAAEQQGE QDDIFGLEKQ LMQSPQWHMP SMPSMPAAPT AHEQEKDDMF GIESEETDDL 1140 FDIAKGTTQH FNDVDFDDLW

Sequence ? help Back to Top

Protein Sequence Length: 1160 aa Download sequence

MGVGGKFWDL LKPYARHEGF DFLRNKRVAV DLSFWIVQHE TAIKDRARSP HLRVTFFRTI  60
NLFSKFGAFP VFVVDGSPSP LKSEARIARF FRSSGIDSSS LPVAGDVKAK GEAEALCAQL  120
DAEGHVDACI TSDSDVFLFG AKCVIKTFQS NSREPFECYY MSDIEAGLGL KRKHLIAISL  180
LVGNDYDLNG VQGVGLDTAL RFAQTFSEDV ILNRLREIGN GDASLLQGEI RSVDDSVPSP  240
DESSLKRKFS HCSFCGHPGS KRTHFKSSCE YCSSTMGEGC MKKSEGFKCS CSSCDMDRKE  300
KEQKKQDNWR LKVLSKIALE PNFPNDAIIE MYLCNSHGYF TENDGLHISW GSPKTEMVVD  360
FLAYHQLWEP SYIRQRMLPM LSTIFLREMA KDPVKSLLYG QYEFDSIDRL KIRYGHQFYV  420
VKWKKSAPSL GCVSCTVPPE ESDMQQDDVM EVDESINPFD ESDVPTIDIN NGCCLLLTDE  480
NMDLVHAAFP EEVDRFLQEK ELKELKRRKT GKPETAGSRG VQLNITEFYR SAKVYETEPG  540
EILTKKTEPG EILSSQRAET SKEKRKPSSS NLPKSKLFEK LWMLKAIANL SDLLIFSSPR  600
LEPVSVLVVD GDSACLAILS RMLCNLGYKV MTAKRAYDAL SIAQKKEDEL HLVLTESHLP  660
DMDKYELLEK MKAVSKVPVV IMSDDDDENA MLGGLFKGAV FYFVKPLTIN SLKNLWQFAI  720
IKNRNHVVID LTEEESSVYG ESQQENTSNE GLESESFMTR DRWLRRKNPE GTYKDEETEN  780
SDSTSQKKPK LVWTNELHKS FLQAVRLLGV DSAHPKNILQ HMNVPGLRKE NVSSHLQKYR  840
LSLKREQEAI MKARARGPKK SNFPSHQSSS TLNFRGGCSQ TPNRYSTSTA YQPKRRSHVQ  900
DLSSHMSRPS PAGSVCFPSQ VYSSGHPTLS NESSFPSMPY HSNYKNGQPT LSNQLYYTNY  960
HNPNHIGNRI TSNKELAGFR QVGSFVRYSN FDGNKNFSSF GDHGHSNLVD FPILLHNSTQ  1020
QEVQQQQQLQ PQVLFSPPLQ MPSPPPQPQE QQENDILGQE RQLQPQFLPS SPLQMPSPSP  1080
LPAAAEQQGE QDDIFGLEKQ LMQSPQWHMP SMPSMPAAPT AHEQEKDDMF GIESEETDDL  1140
FDIAKGTTQH FNDVDFDDLW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	502	508	LKELKRR
2	503	509	KELKRRK
3	894	898	KRRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	9e-53	ARR-B family protein