PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001626.1_g030.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 506aa MW: 56640.1 Da PI: 4.6785

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001626.1_g030.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	83.1	5.6e-26	183	303	14	128
NAM 14 lvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+ ++Lk+ ++gk ++ ++i+e+d++k+eP+dL + + + w+ Fs+ + k+ ++ r nr+tk+g+Wk tgk +e++ Pav_sc0001626.1_g030.1.br 183 LILRFLKQMMQGKASQACHIIPEIDVCKYEPSDLAEllfpDSPYQPRMWFSFSRPHYKSINSLRYNRVTKKGFWKITGKPREIK 266 899*********999999**********85455533447789********************************** PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ ++ ++ k+tL+f++g +k++ktdWv++ey l Pav_sc0001626.1_g030.1.br 267 SQqlSKLVTCKKRTLTFHEGCVSKSTKTDWVIQEYYL 303 864444466678*********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MHEEEQLHDD EKTGSDGLQQ AGEVLGQSAR SAMDVEVLCM DHLRKSRDIR DSSSEAATL* 60 FLLADSCGTV ECNVDLNLGS QKQPDLAAPK TIWDSLDSAS RNNATVLHEL SPPEMSAARI 120 AGGMRSTTTE EWLLPLLRGF RFHPPEEEMV NLLSKKMEGQ GSQAMPEIDY KPWNLPDNES 180 ISLILRFLKQ MMQGKASQAC HIIPEIDVCK YEPSDLAELL FPDSPYQPRM WFSFSRPHYK 240 SINSLRYNRV TKKGFWKITG KPREIKSQQL SKLVTCKKRT LTFHEGCVSK STKTDWVIQE 300 YYLTQTELVS IPNQLSDFVL CRTKNKSAHY ESDNKKLKDA SICDESADPG IGGYMASNSE 360 DDQAPANNMI PEADRHLADK ELEHDLPGSG NHDAGEPGGC VSSDCDDMIQ ELSAQPGEYL 420 DLPFPPPEPP EPGNASVPSP IGNNDSSLPN KNNITTNYDS KPVSNTASNF ENQTKDERTS 480 EVRMNMLFEI FIYELLNIEH KKNNET

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MHEEEQLHDD EKTGSDGLQQ AGEVLGQSAR SAMDVEVLCM DHLRKSRDIR DSSSEAATL*  60
FLLADSCGTV ECNVDLNLGS QKQPDLAAPK TIWDSLDSAS RNNATVLHEL SPPEMSAARI  120
AGGMRSTTTE EWLLPLLRGF RFHPPEEEMV NLLSKKMEGQ GSQAMPEIDY KPWNLPDNES  180
ISLILRFLKQ MMQGKASQAC HIIPEIDVCK YEPSDLAELL FPDSPYQPRM WFSFSRPHYK  240
SINSLRYNRV TKKGFWKITG KPREIKSQQL SKLVTCKKRT LTFHEGCVSK STKTDWVIQE  300
YYLTQTELVS IPNQLSDFVL CRTKNKSAHY ESDNKKLKDA SICDESADPG IGGYMASNSE  360
DDQAPANNMI PEADRHLADK ELEHDLPGSG NHDAGEPGGC VSSDCDDMIQ ELSAQPGEYL  420
DLPFPPPEPP EPGNASVPSP IGNNDSSLPN KNNITTNYDS KPVSNTASNF ENQTKDERTS  480
EVRMNMLFEI FIYELLNIEH KKNNET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	1e-22	NAC family protein