PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001554.1_g180.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 365aa MW: 41331.7 Da PI: 4.6834

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001554.1_g180.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.1	7.2e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lppGfrFhPtdeelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k + + ew+fF+ rd+ky++g+r+nratk+gy Pav_sc0001554.1_g180.1.mk 6 LPPGFRFHPTDEELVGYYLKRKVEGLEFEL-EVIPVIDLYKFDPWELPeKsFLPRCDMEWFFFCARDRKYPNGSRTNRATKAGY 88 79**************************.99**********94333444677********************** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 Wkatgkd++v++ +++++g +ktLvfy+grap g +tdW+mheyrl Pav_sc0001554.1_g180.1.mk 89 WKATGKDRKVVC-QSTVTGYRKTLVFYRGRAPLGDRTDWIMHEYRL 133 ********.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLKRKVEG LEFELEVIPV IDLYKFDPWE LPEKSFLPRC 60 DMEWFFFCAR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSTVTGYRKT LVFYRGRAPL 120 GDRTDWIMHE YRLSDDLAQG PSGHQGVFAL CRVIKKNENP QKTNDSHGEP KAKRVGSASN 180 TGEDLSSTRI SNEPLNISDD LASQASYQHN ESHYSSHVTS PYEVNPMAEF EPTSRETNPA 240 DFWVSPDFIL DSSKDYPQLQ AAMPNYFPQY KSAMASWQSY ENTESPYSSY SNFTGGVTMA 300 DNANQVSDMS PFSGHTDYTG YYGNEEMQFE GSENQTPICM QVSIDGSLGE LGELWSQEDN 360 MVIVM

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MGGASLPPGF RFHPTDEELV GYYLKRKVEG LEFELEVIPV IDLYKFDPWE LPEKSFLPRC  60
DMEWFFFCAR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSTVTGYRKT LVFYRGRAPL  120
GDRTDWIMHE YRLSDDLAQG PSGHQGVFAL CRVIKKNENP QKTNDSHGEP KAKRVGSASN  180
TGEDLSSTRI SNEPLNISDD LASQASYQHN ESHYSSHVTS PYEVNPMAEF EPTSRETNPA  240
DFWVSPDFIL DSSKDYPQLQ AAMPNYFPQY KSAMASWQSY ENTESPYSSY SNFTGGVTMA  300
DNANQVSDMS PFSGHTDYTG YYGNEEMQFE GSENQTPICM QVSIDGSLGE LGELWSQEDN  360
MVIVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-103	NAC family protein