PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001543.1_g060.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 445aa MW: 50550.8 Da PI: 6.8597

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001543.1_g060.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.7	4.1e-28	88	175	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ ++++t+Cka+++vk++ dgkw ++++ +e Pav_sc0001543.1_g060.1.mk 88 SFYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDSG---TSRRPTVKKTDCKASMHVKRRADGKWIIHEFIKE 168 5**************************************999888...7788889*********************** PP FAR1 85 HnHelap 91 HnHel p Pav_sc0001543.1_g060.1.mk 169 HNHELLP 175 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MMMHQDMLKE HISHCWQLAF EMVVDGPENM NGGRVSENMN MVAVVEEVQN RGGVVISSPK 60 RDIQVFEGDT DFEPCNGIEF ESHEAAYSFY QEYAKSMGFT TSIKNSRRSK KSKEFIDAKF 120 ACSRYGVTPE SDSGTSRRPT VKKTDCKASM HVKRRADGKW IIHEFIKEHN HELLPALAYH 180 FRIHRNVKLA EKNNIDILHA VEVLGVVGCQ PKKEHEDGPT TTFRVQDCEK DEYFMVTWNE 240 TKSEVSCSCQ GSISEETYNI AFRTLVEALK NCVNVNNSNN TVVDFSGTVH SIREAEEENQ 300 GSLASKTSRK KITNRKRKVQ AEQDVILVEA QDSLQQMDNL SSDGIPLTGY YGAQQNVHGL 360 VQLNLMEPPH DSYYVNQQSM QGLGQLNSIA PNHDGFFGTQ QSIHGLGQLD FRPSTSFSYS 420 LQIFTVAWRC FKTFMRKKRL PSWSN

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MMMHQDMLKE HISHCWQLAF EMVVDGPENM NGGRVSENMN MVAVVEEVQN RGGVVISSPK  60
RDIQVFEGDT DFEPCNGIEF ESHEAAYSFY QEYAKSMGFT TSIKNSRRSK KSKEFIDAKF  120
ACSRYGVTPE SDSGTSRRPT VKKTDCKASM HVKRRADGKW IIHEFIKEHN HELLPALAYH  180
FRIHRNVKLA EKNNIDILHA VEVLGVVGCQ PKKEHEDGPT TTFRVQDCEK DEYFMVTWNE  240
TKSEVSCSCQ GSISEETYNI AFRTLVEALK NCVNVNNSNN TVVDFSGTVH SIREAEEENQ  300
GSLASKTSRK KITNRKRKVQ AEQDVILVEA QDSLQQMDNL SSDGIPLTGY YGAQQNVHGL  360
VQLNLMEPPH DSYYVNQQSM QGLGQLNSIA PNHDGFFGTQ QSIHGLGQLD FRPSTSFSYS  420
LQIFTVAWRC FKTFMRKKRL PSWSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	4e-62	FAR1 family protein