PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001540.1_g510.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 715aa MW: 81374 Da PI: 6.6714

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001540.1_g510.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.3	3.4e-20	74	164	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 ++Y +YAk +GFsvrk+k ++ +g++ +r+++Cskeg r+e+ ++ +++ r++++ tr +C a++ v ek +++++vtk+e Pav_sc0001540.1_g510.1.br 74 EYYMSYAKGIGFSVRKDKLIRN-LEGKVCRRRWCCSKEGLRNEKFNDrSDRIRQPKPITRENCPAHFWVGYEKkRDTYVVTKFE 156 69****************99.7788**********9998875788899************99989***** PP FAR1 83 leHnHela 90 +HnHel+ Pav_sc0001540.1_g510.1.br 157 PHHNHELV 164 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 715 aa Download sequence
MDRGVETSKG GCSDSGYLGG CESSSQGEPA TASVNMSVEH PVSQSSDDNG VEIIVPRKED 60 VMGKEFKTIE LAEEYYMSYA KGIGFSVRKD KLIRNLEGKV CRRRWCCSKE GLRNEKFNDR 120 SDRIRQPKPI TRENCPAHFW VGYEKKRDTY VVTKFEPHHN HELVTPLESP YPRCNRVVRN 180 SDLAQAVGMR RALVRTCQTY EYMVDQCGGY LNVGFQIKDL YNKLDASRRE ILLDGDTEAA 240 LSYLKAKGAM DPEFFCKFSV DEENRLVVIG NLMASMKDKK PISILTDGDE AMRKAIDDVF 300 PMSNHRLCSW HVSRNAQTNL KDDELLRNFQ ACLWEPFALD EFEKKWEVLR ERASTPKQKE 360 WLEMMYAKRD SWAESCLRGK FFGGMCTTQR VESMNKYVKD YLRKGVKLFE CIPAIDRAML 420 RLRNTTAKDG FNAKYSTPVL KTALTKLEQQ AYLIYTHRCF VLVREEIEAC SALIHDKVMY 480 NFGGRVYVLS KYGESHNNWT CVYHGGENMR IECGCRKYES EGIPCCHLFY VMKCEHLTEI 540 PPTLIMKRWT KSAQSDTCTE CFDKGKDTTN EGVEMARYGS LSAMSNKVCF YASKSADGYA 600 MLRNEFSRWE GICEGLREKE EETSLKLGSE SYQYSTEKVP SPDISYSYAS EMGSQCKGNY 660 VVDLSGSDSF STADGTGSTP NTDDGFSFDN GELISLSTGS TQNNCSFGTW FTCNN

Sequence ? help Back to Top

Protein Sequence Length: 715 aa Download sequence

MDRGVETSKG GCSDSGYLGG CESSSQGEPA TASVNMSVEH PVSQSSDDNG VEIIVPRKED  60
VMGKEFKTIE LAEEYYMSYA KGIGFSVRKD KLIRNLEGKV CRRRWCCSKE GLRNEKFNDR  120
SDRIRQPKPI TRENCPAHFW VGYEKKRDTY VVTKFEPHHN HELVTPLESP YPRCNRVVRN  180
SDLAQAVGMR RALVRTCQTY EYMVDQCGGY LNVGFQIKDL YNKLDASRRE ILLDGDTEAA  240
LSYLKAKGAM DPEFFCKFSV DEENRLVVIG NLMASMKDKK PISILTDGDE AMRKAIDDVF  300
PMSNHRLCSW HVSRNAQTNL KDDELLRNFQ ACLWEPFALD EFEKKWEVLR ERASTPKQKE  360
WLEMMYAKRD SWAESCLRGK FFGGMCTTQR VESMNKYVKD YLRKGVKLFE CIPAIDRAML  420
RLRNTTAKDG FNAKYSTPVL KTALTKLEQQ AYLIYTHRCF VLVREEIEAC SALIHDKVMY  480
NFGGRVYVLS KYGESHNNWT CVYHGGENMR IECGCRKYES EGIPCCHLFY VMKCEHLTEI  540
PPTLIMKRWT KSAQSDTCTE CFDKGKDTTN EGVEMARYGS LSAMSNKVCF YASKSADGYA  600
MLRNEFSRWE GICEGLREKE EETSLKLGSE SYQYSTEKVP SPDISYSYAS EMGSQCKGNY  660
VVDLSGSDSF STADGTGSTP NTDDGFSFDN GELISLSTGS TQNNCSFGTW FTCNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-43	FAR1 family protein