PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001528.1_g010.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 449aa MW: 52516.4 Da PI: 7.8217

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001528.1_g010.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.7	6.9e-22	45	132	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 Yn+YA+++GFsvr+ +++++ +++ + + Cske +r +++++ e + ++ etrtgC+a+++ ++ +g w+v+++++e Pav_sc0001528.1_g010.1.br 45 LYNSYATRTGFSVRRGQKRYN-TKKVLRQFSYFCSKEDFRLDSDTS-EVSTANKLETRTGCEARIRFAFQDdNGMWKVSHFVSE 126 7**************9998.66779999*********999.99999************9999******** PP FAR1 85 HnHela 90 HnHela Pav_sc0001528.1_g010.1.br 127 HNHELA 132 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MLWRVQVVID IESEEENPMI VNRMESFQED LLGKVVSTEE EAYNLYNSYA TRTGFSVRRG 60 QKRYNTKKVL RQFSYFCSKE DFRLDSDTSE VSTANKLETR TGCEARIRFA FQDDNGMWKV 120 SHFVSEHNHE LAMPEERQFL RSNRKVSEAH LGVIKTMVDA GIRTTNTYSY LSEEVGGSQN 180 VGFTKRDCYN VVNKEKMVMI EAGDAQSLIN LFKREQAEDP MFFYTVQVDQ ENRMTNFFWR 240 DGRSRIDYDC FGDVVVFDTT YRTNRYNMIC APFVGVNHHW KNVLFGCAFL LDEKTNSFIW 300 LFETFLESMG GRKPKTIFTD QCQAMANGIQ NVFPRVCHRL CSWHISQNAA RNLGSYYGNP 360 EFNHMFNKCL QGYCETELEF QSTWDNLLAK FNLTGNLWLK TLYILRAKWC PVFSQHIFTA 420 KIKSSQRSES TNNVFHQMST KQKKCVQVN

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MLWRVQVVID IESEEENPMI VNRMESFQED LLGKVVSTEE EAYNLYNSYA TRTGFSVRRG  60
QKRYNTKKVL RQFSYFCSKE DFRLDSDTSE VSTANKLETR TGCEARIRFA FQDDNGMWKV  120
SHFVSEHNHE LAMPEERQFL RSNRKVSEAH LGVIKTMVDA GIRTTNTYSY LSEEVGGSQN  180
VGFTKRDCYN VVNKEKMVMI EAGDAQSLIN LFKREQAEDP MFFYTVQVDQ ENRMTNFFWR  240
DGRSRIDYDC FGDVVVFDTT YRTNRYNMIC APFVGVNHHW KNVLFGCAFL LDEKTNSFIW  300
LFETFLESMG GRKPKTIFTD QCQAMANGIQ NVFPRVCHRL CSWHISQNAA RNLGSYYGNP  360
EFNHMFNKCL QGYCETELEF QSTWDNLLAK FNLTGNLWLK TLYILRAKWC PVFSQHIFTA  420
KIKSSQRSES TNNVFHQMST KQKKCVQVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-88	FAR1 family protein