PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001518.1_g660.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 208aa MW: 23011.7 Da PI: 6.3768

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001518.1_g660.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.6	5.4e-08	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Ht 38 +C+ +e++e++ fC ++ lC+ C H + H+ Pav_sc0001518.1_g660.1.mk 3 IRCDVCEKEEATVFCSADEAALCDVCDRRVH-YanklagkHK 43 58*************************9999.4355666665 PP
2	zf-B_box	25.2	3.3e-08	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e + lfC++++ lC++C +++Hk Ht Pav_sc0001518.1_g660.1.mk 55 SPLCDICQERRGFLFCQQDRAILCRECDFSIHKTneHT 92 689*****9*******************888865 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MKIRCDVCEK EEATVFCSAD EAALCDVCDR RVHYANKLAG KHKRFCLLHP TFKDSPLCDI 60 CQERRGFLFC QQDRAILCRE CDFSIHKTNE HTQNHSRFLL PGVKLSAAAS LYPTSSSSCS 120 GFSQVANTTD ARATKSSSKR PKTVSDEALN CSPSVEQTTS SSSYKTEENC GSDNGSVSTS 180 SISEYLMETL PGWHVEDFFN FSFAPDGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	4e-68	DBB family protein