PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001505.1_g080.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 294aa    MW: 31310.8 Da    PI: 5.2028
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001505.1_g080.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.82.3e-16202238135
                       GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                C++Cg ++  Tp++Rrgp g++tLCnaCGl+++ kg+
  Pav_sc0001505.1_g080.1.mk 202 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 238
                                *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSESNHQNSM YGSGGAPQSN QVEEQEDDVE ESIDNPHIRF EDSSAIPPNP LYLTGSEYPP  60
AAATNGGSDQ LTLSFQGEVY VFDEVSPDKV QAVLLLLGGY EIPSGIPSMG PVPLNQQGMN  120
DLPVKPIQPQ RAASLSRFRE KRKERCFDKK IRYTVRKEVA LRMQRKKGQF TSSKASSDDG  180
GPASSGATQG SGQDESMQET SCTHCGISSK STPMMRRGPA GPRTLCNACG LKWANKGVLT  240
GGPKVSNIGM QDPSAKGIEQ GDGEAKDPVA ITMGANIAPS SNGDNSAMTV DRNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-68GATA family protein