PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001461.1_g460.1.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WOX
Protein Properties Length: 220aa    MW: 25412.5 Da    PI: 5.1414
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001461.1_g460.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.38.6e-21102162257
                                T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                r+R+t+t+ ql+ Le+ Fe+ + +p +++++e++++l    +++e++V++WFqNrRa+ k+
  Pav_sc0001461.1_g460.1.mk 102 RQRWTPTPVQLQMLERIFEEgTGTPCKQKIKEITMELtqhgQISETNVYNWFQNRRARSKR 162
                                89*****************99**************************************97 PP

2Wus_type_Homeobox100.99.2e-33101164265
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                                ar+RWtPtp Q+++Le+++++G+ tP k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq
  Pav_sc0001461.1_g460.1.mk 101 ARQRWTPTPVQLQMLERIFEEGTGTPCKQKIKEITMELTQHGQISETNVYNWFQNRRARSKRKQ 164
                                789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MMEWQQQQQQ QQQIQNQQQI IHHLQNPEDG IGNGNGGLYV KVMTDEQMEL LRRQIAVYAT  60
ICEQLVEMHK AVTAQQDLTG MRLGNFYCDP FMASGGHKIT ARQRWTPTPV QLQMLERIFE  120
EGTGTPCKQK IKEITMELTQ HGQISETNVY NWFQNRRARS KRKQSVPAQN NGESEAEPEV  180
ESPRDEKTKP EDIMSLDNSA PRAENMYLQS PELGFGNFDW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156164RRARSKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35550.19e-75WOX family protein