PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001454.1_g330.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 24938.9 Da PI: 10.709 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.6 | 2.5e-07 | 179 | 212 | 2 | 43 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksr 43 g+WT+eE v+++G ++W Ia+ ++ gR +kqc++r Pav_sc0001454.1_g330.1.br 179 GPWTKEE-------VERHGAKRWYVIAKFLP-GRMGKQCRER 212 5666666.......899**************.********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MKTLFLLETL LSSFLSLLES LLSSLKQSLS HFFATHTYLP ATPWMQRHHR CQRRLEAIDA 60 IDAVMPSKPP KPQRHRHHDA TDAILSHPRH RRHRLLRISH HQPPATPTTY LVSFFSCALL 120 LCSEEFFSLR DMSAQMHQIY RNLLQILSGR ATSPMRRSAK CWTEEERWQN VLNPEIVKGP 180 WTKEEVERHG AKRWYVIAKF LPGRMGKQCR ER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.1 | 5e-19 | MYB family protein |