PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001405.1_g690.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 893aa MW: 101887 Da PI: 5.1848

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001405.1_g690.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81	2.1e-25	77	161	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++Hn Pav_sc0001405.1_g690.1.mk 77 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYRVTQFEEQHN 159 ****************************************999.999********************************* PP FAR1 87 He 88 H Pav_sc0001405.1_g690.1.mk 160 HG 161 *5 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MEREDDDFGS LHEDSMDVGL QATNRLDLNV EQDSRSPKVV YVNGTQSNPP SIGADSKDSV 60 LEVGTEFESD EHAYKSYNKY ARLVGFNVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR 120 DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTQFEEQHNH GNVNSSIPQA LPEQHNHDNV 180 ILSIAQALPL QRECTVPEAA DADSVNELGS LSKSALDSMN RGFRVRESVD SFALDFENYL 240 QSERTRDMKE GEVGRLLYYF QRQHFENPSF FYAIQVDTDD KVSNILWADD NMVSDYDHFG 300 DVVCLDTLCR ADKNCLPFVQ FVGVNNHKQA VIFSAALLYD DTVQSYKWLF QTFLESMSGK 360 KPKAIHTDQD AAIVEASNSV LPETDHRICT WQMCENALKH LNHMVKDTES FANDFKSCIY 420 DQKDEDGFVY AWGNMLDNYG LQQNDRLKWM FREREKWAVV YGRNTFFVDR KGSHLVESLF 480 HDLRNYLYSD LDVLDFVKYF KRVVDEQRYK ETEANDEMNR CMPRLMGNVI LLKHASDVYT 540 PRAFEVFQRG YEKCLNIVVN QCSENGPLFE YKTNIFGKSR EHTVTFNSSD DTVICSCKKF 600 DSVGFLCSHA LKVLDHMNIK VVPSKYILKR WTKDARLGSA RESDVSSIRD NPKLVVASRY 660 KNMCGRIVML SAKASESEEA FQFAVGQLDE VMEGVEKILT LKPQDAQAFT SSSTANASDS 720 ERAVIFRDGN AIEDQDDNVV KGAKEKETAV FDNGQLTNVN GELSSTKRIL NVDTSLQNTD 780 SCISSPSLYV SPEGTTANPI MQGLYNFEAN QVDQCLYQQD NLVMEEQTNP NMYQPLDFFS 840 NQHDSPGHSQ LLQEPLINGT YQEVVSSTPE LRQAMDLDVQ HAHSSSFLLL DRG

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MEREDDDFGS LHEDSMDVGL QATNRLDLNV EQDSRSPKVV YVNGTQSNPP SIGADSKDSV  60
LEVGTEFESD EHAYKSYNKY ARLVGFNVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR  120
DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTQFEEQHNH GNVNSSIPQA LPEQHNHDNV  180
ILSIAQALPL QRECTVPEAA DADSVNELGS LSKSALDSMN RGFRVRESVD SFALDFENYL  240
QSERTRDMKE GEVGRLLYYF QRQHFENPSF FYAIQVDTDD KVSNILWADD NMVSDYDHFG  300
DVVCLDTLCR ADKNCLPFVQ FVGVNNHKQA VIFSAALLYD DTVQSYKWLF QTFLESMSGK  360
KPKAIHTDQD AAIVEASNSV LPETDHRICT WQMCENALKH LNHMVKDTES FANDFKSCIY  420
DQKDEDGFVY AWGNMLDNYG LQQNDRLKWM FREREKWAVV YGRNTFFVDR KGSHLVESLF  480
HDLRNYLYSD LDVLDFVKYF KRVVDEQRYK ETEANDEMNR CMPRLMGNVI LLKHASDVYT  540
PRAFEVFQRG YEKCLNIVVN QCSENGPLFE YKTNIFGKSR EHTVTFNSSD DTVICSCKKF  600
DSVGFLCSHA LKVLDHMNIK VVPSKYILKR WTKDARLGSA RESDVSSIRD NPKLVVASRY  660
KNMCGRIVML SAKASESEEA FQFAVGQLDE VMEGVEKILT LKPQDAQAFT SSSTANASDS  720
ERAVIFRDGN AIEDQDDNVV KGAKEKETAV FDNGQLTNVN GELSSTKRIL NVDTSLQNTD  780
SCISSPSLYV SPEGTTANPI MQGLYNFEAN QVDQCLYQQD NLVMEEQTNP NMYQPLDFFS  840
NQHDSPGHSQ LLQEPLINGT YQEVVSSTPE LRQAMDLDVQ HAHSSSFLLL DRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-97	FAR1 family protein