PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001323.1_g190.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 227aa MW: 24494.3 Da PI: 5.4476 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.7e-13 | 163 | 208 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ +k + a++L +AveY+k Lq Pav_sc0001323.1_g190.1.mk 163 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLDEAVEYVKFLQ 208 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MQRAAGGSSS GGGEVSRGGG LGRFCSAPAT WLEALLEEEE EDPLKPTQCL TELLAENTGA 60 TSVGFGSTTV DPVSYEAAAA AGFLSRQNSS PAEFLGSSTD GSEGYFSGFG IPAHLDFASL 120 SPNSSSPPAN KRVREVKLEE SGLEDAVPCR VRAKRGCATH PRSIAERVRR TRISDRIRKL 180 QELVPNMDKQ TNTADMLDEA VEYVKFLQKQ IQELSEHQRR CKCIAKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G35460.1 | 1e-59 | bHLH family protein |