PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001313.1_g070.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 161aa MW: 18301.8 Da PI: 8.296 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 72 | 1.5e-22 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykve.Pwd.LpkkvkaeekewyfFskrdkkyatgkrknratk... 79 lp+Gf+F+P++ el+ +yL +kv+g +l+ +++ e+d+y e w+ L +++e+++yfF++ +kk+a+g+r +r+t+ Pav_sc0001313.1_g070.1.mk 9 LPVGFQFEPSEMELLAHYLYNKVNGLPLSS-NAVIECDLYGEEeTWRrLF--DETGETSLYFFTELKKKTAKGSRVERTTSlgg 89 79*************************999.7788999998751444142..34578899******************998533 PP NAM 80 sgyWkatgkdkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 +W+++ +dk+++ + +++l+g k+t+ + +++++ k + vmhe+rl Pav_sc0001313.1_g070.1.mk 90 CVTWRNQ-SDKAIYGNdgppNKTLIGYKRTFSYVPKKTSTKAKGEMVMHEFRL 141 3359977.6799999888888889**********99999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
METARSLGLP VGFQFEPSEM ELLAHYLYNK VNGLPLSSNA VIECDLYGEE ETWRRLFDET 60 GETSLYFFTE LKKKTAKGSR VERTTSLGGC VTWRNQSDKA IYGNDGPPNK TLIGYKRTFS 120 YVPKKTSTKA KGEMVMHEFR LAGCLLNNNN QSCLYLFLNF P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07680.1 | 2e-18 | NAC family protein |