PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001296.1_g010.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 164aa MW: 18714.5 Da PI: 10.4023 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 69.5 | 8.2e-22 | 42 | 130 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+YA +GF +r ++s + ++++ei +++fvC k+g ++ +++ +++r+r +r++Ckak++v k++ ++k+ ++ + + Pav_sc0001296.1_g010.1.br 42 NFYNRYAFFAGFGIRLHSSFRGTNKKEILRKEFVCCKQGAYRKYETR--ERKRQRGISRCNCKAKIVVVKTNgSKKYAISLFAE 123 6**************************************99887766..8999*************9999998*********** PP FAR1 84 eHnHela 90 HnH+++ Pav_sc0001296.1_g010.1.br 124 GHNHKMT 130 ****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MSGGSESDDC VTANGMVYIP EVRNEETPAV GMKFDSLDLA YNFYNRYAFF AGFGIRLHSS 60 FRGTNKKEIL RKEFVCCKQG AYRKYETRER KRQRGISRCN CKAKIVVVKT NGSKKYAISL 120 FAEGHNHKMT ASERVHLLRS HRRISDSTKV LTKQLGSVNI PIHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-21 | FAR1 family protein |