PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001275.1_g510.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 445aa MW: 49699 Da PI: 6.4394

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001275.1_g510.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	382	415	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Pav_sc0001275.1_g510.1.mk 382 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 415 469*****************************87 PP
2	ELK	28.7	2.9e-10	336	357	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Pav_sc0001275.1_g510.1.mk 336 ELKHELKQGYKEKIVDIREEIL 357 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPR EPHHPFQPAP NWLNTALLRN 60 YTNADANNNH NNNNGGGGAS NFLNLHVTAS DSTTSQASNQ WLSQPHRPIL HRNHSDVIDD 120 VTAVGGDSMI AATISHDSAD LKPDSSLNKT DIVVESGGGG GDGGMINWQN ARHKAEILAH 180 PLYEPLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY SALGHGMVGD DKELDQFMRH 240 YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDEDDQVDS 300 DANLFDGSMD GHDSMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR 360 RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN 420 PSTSTVLKSK RKRSNAGENS GDRFG

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MAYHNHLSQQ DLPLHHFTDQ TQQQHQPFQS DQPDPNSKPR EPHHPFQPAP NWLNTALLRN  60
YTNADANNNH NNNNGGGGAS NFLNLHVTAS DSTTSQASNQ WLSQPHRPIL HRNHSDVIDD  120
VTAVGGDSMI AATISHDSAD LKPDSSLNKT DIVVESGGGG GDGGMINWQN ARHKAEILAH  180
PLYEPLLSAH VACLRIATPV DQLPRIDAQL AQSQNVVAKY SALGHGMVGD DKELDQFMRH  240
YVLLLCSFKE QLQQHVRVHA MEAVMACWEI EQSLQSLTGV SPGEGTGATM SDDEDDQVDS  300
DANLFDGSMD GHDSMGFGPL IPTESERSLM ERVRQELKHE LKQGYKEKIV DIREEILRKR  360
RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI NQRKRNWHSN  420
PSTSTVLKSK RKRSNAGENS GDRFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	413	433	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein