PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0001196.1_g460.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 118aa MW: 13567.4 Da PI: 5.7622 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 32.4 | 1.6e-10 | 16 | 96 | 13 | 89 |
TT-EE--HHH.HTT...---..--SEEEEEETTS..-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 13 sgrlvlpkkfaeeh...ggkkeesktltledesg..rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89 +grl +p + + ++ +++s+++++e ++g W++ +++rkk+ r ++ ++GW +Fv+a+gL++gD vv+ + ++ Pav_sc0001196.1_g460.1.br 16 EGRLAVPSEWL-KIlppF--ENGSFEVQFEVTDGvgFYWQLCCSIRKKGYRkpVLQSEGWLKFVNAKGLQVGDKVVIDTEANDF 96 46789999999.555542..45777888887777447777777776666556566679******************99665433 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 118 aa Download sequence |
MAHFEFEKYL TETDIEGRLA VPSEWLKILP PFENGSFEVQ FEVTDGVGFY WQLCCSIRKK 60 GYRKPVLQSE GWLKFVNAKG LQVGDKVVID TEANDFRGTN IRIRAQKDLN GNGHWVDV |