PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001196.1_g2090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 407aa MW: 45941.9 Da PI: 8.3169

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001196.1_g2090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	120	2.2e-37	3	109	21	128
NAM 21 kkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + +glk Pav_sc0001196.1_g2090.1.mk 3 DKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENLRSIGLK 84 6899999999.89*************888889********************************************* PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 ktLvfy+g+apkg +t+W+m+eyrl Pav_sc0001196.1_g2090.1.mk 85 KTLVFYSGKAPKGIRTSWIMNEYRL 109 *********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MLDKVEGKRF NVELITFLDL YRYDPWELPA MAAIGEKEWF FYVPRDRKYR NGDRPNRVTT 60 SGYWKATGAD RMIRSENLRS IGLKKTLVFY SGKAPKGIRT SWIMNEYRLP HHETERYQKG 120 EISLCRVYKR AGVEDHPSLP RSLPASRAST SRSSVLVAPS TTISSDNKKQ HNTSTNINNS 180 NINTVHSIME KLQAFNEGQA QQFHQDHEHQ VDQKMSVEPE GSSGNSDVTT VLGLSKHNAY 240 HHHNNIGQAH HHPLDQEEGM AAFLHHSNSK QAAANCFSLI PSSTNSSAML FTAGSSSVSS 300 SNMNAIDDLH RLLTYQHVQQ QAAASSSHHQ QQHVHHHVVQ YYDDAHHNPQ PNSIFSTFPA 360 AAPHVQSAIP PPQQLASNAL PTAFSDRLWD WNPISETNRP DYNNPFK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MLDKVEGKRF NVELITFLDL YRYDPWELPA MAAIGEKEWF FYVPRDRKYR NGDRPNRVTT  60
SGYWKATGAD RMIRSENLRS IGLKKTLVFY SGKAPKGIRT SWIMNEYRLP HHETERYQKG  120
EISLCRVYKR AGVEDHPSLP RSLPASRAST SRSSVLVAPS TTISSDNKKQ HNTSTNINNS  180
NINTVHSIME KLQAFNEGQA QQFHQDHEHQ VDQKMSVEPE GSSGNSDVTT VLGLSKHNAY  240
HHHNNIGQAH HHPLDQEEGM AAFLHHSNSK QAAANCFSLI PSSTNSSAML FTAGSSSVSS  300
SNMNAIDDLH RLLTYQHVQQ QAAASSSHHQ QQHVHHHVVQ YYDDAHHNPQ PNSIFSTFPA  360
AAPHVQSAIP PPQQLASNAL PTAFSDRLWD WNPISETNRP DYNNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	2e-95	NAC family protein