PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001196.1_g1930.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 342aa    MW: 37442.9 Da    PI: 7.6968
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001196.1_g1930.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1024e-32109165360
                 ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                                 +v+YkeClkNhAa++Gg+a+DGCgEfmps geegt++al+C+AC+CHRnFHR+eve e
  Pav_sc0001196.1_g1930.1.mk 109 GVKYKECLKNHAAAMGGTATDGCGEFMPS-GEEGTIEALNCSACNCHRNFHRKEVEGE 165
                                 689*************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MELSSQEAGE IPIPINSSYG GGHGHGHMIH HNHHHHDPAA AAAAAAVVPH NHSNLIPSSA  60
VPQNQNPSNT NGSSMPTSLD HHHHHHHSHP HHEEEEHVNI VPYSCKKVGV KYKECLKNHA  120
AAMGGTATDG CGEFMPSGEE GTIEALNCSA CNCHRNFHRK EVEGEQQPSP SSWDHNFHHT  180
INRVGVGSRK FLLGPGHHKN LLAAPPEGLG YHTMPSSRTA APHQMIMSYN MGMGMGMGMG  240
ALPSESDEQE EHDGGGVVGR PAAAQLAKKR FRTKFTQEQK EKMFNFAEKV GWKIQKQEDS  300
VVQNFCQEIG VKRRVLKVWM HNNKHNLAKK NPPPPPPPPP PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.19e-74ZF-HD family protein