PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001183.1_g240.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 172aa MW: 20363.1 Da PI: 6.9351 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 111.5 | 9.5e-35 | 5 | 128 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksg 81 frF Pt+eelv++yL++k + + ++i+e+di+k+ePwd p + ++ ++++fFs+r +y+++ r +r+t+ g Pav_sc0001183.1_g240.1.br 5 FRFLPTEEELVSHYLREKKQVD-----HIIPEIDICKHEPWDVPGlyaglftEPESPYQDMFFFSPRVYEYNNSARIERTTALG 83 9**************9985544.....47***************54666544333344588*********************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +Wk tgk++ +++ + +g kktL+fy+gr ++++kt+Wvm ey l Pav_sc0001183.1_g240.1.br 84 FWKITGKERVIKA--RGSTGRKKTLTFYEGRVRQSKKTNWVMYEYYL 128 ********99998..5569**************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MDSYFRFLPT EEELVSHYLR EKKQVDHIIP EIDICKHEPW DVPGLYAGLF TEPESPYQDM 60 FFFSPRVYEY NNSARIERTT ALGFWKITGK ERVIKARGST GRKKTLTFYE GRVRQSKKTN 120 WVMYEYYLVE DEANPNPTLA QQRDFVLCRL KKKADDKKHT SIYAEAEPAC DE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-38 | NAC family protein |