PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001183.1_g200.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 164aa MW: 19266.1 Da PI: 7.5908 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 98.1 | 1.3e-30 | 5 | 124 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkya..tgkrknratk 79 frF Pt+eelv +yL+kk + + ++i+e+di ++ePwd p + ++ ++++fFs+r ky + r+n at+ Pav_sc0001183.1_g200.1.br 5 FRFLPTEEELV-HYLRKKKQVD-----HIIPEIDISNYEPWDVPGlyaglftEPDSPYQDMFFFSPRVYKYIdnNYARTNSATA 82 9**********.9**9985544.....47***************54666544333344588*********98434569999*** PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+Wk+tgk++ +++ + +g k+tL+fy +g+kt+Wvmhey+l Pav_sc0001183.1_g200.1.br 83 RGFWKTTGKERVIKA--RGSIGRKRTLIFY-----EGNKTNWVMHEYSL 124 **********99998..557**********.....7889********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MDSNFRFLPT EEELVHYLRK KKQVDHIIPE IDISNYEPWD VPGLYAGLFT EPDSPYQDMF 60 FFSPRVYKYI DNNYARTNSA TARGFWKTTG KERVIKARGS IGRKRTLIFY EGNKTNWVMH 120 EYSLIEDEAN PPTPKLAHQV ILLHPCLLYI LCCVWLVQHQ VPLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 4e-29 | NAC family protein |