PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001183.1_g040.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 371aa MW: 42569.4 Da PI: 6.4443

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001183.1_g040.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	128.2	6.5e-40	16	144	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePwdL k +k ++++ +fFs+ +y+ +k+++r+t+ g+ Pav_sc0001183.1_g040.1.br 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWDLVaKsLMKPDDESGFFFSQP--EYTPKKKTKRTTEVGF 97 79**************************999**********7442444466666888876..4566889***** PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 Wk tg+++++ ++ +++++g k++L+fy g+ +++ kt+Wvmhey Pav_sc0001183.1_g040.1.br 98 WKITGREHDIRTRdrRRTVIGKKRILTFYIGQVRNSDKTNWVMHEYY 144 *******99767778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK 120 RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKNNVKNAD VATTCDEGET 180 HNASDVEYQP VNDMNMEDTR PPENGDYFER ARDLLLANSL SNNDHNAFPP EFSANDQEFL 240 RTLIVEPQFR VTSDTDREPV HHRVQSLQMR CEPQILYKLQ CGSSQSRRDT DVILHNQLSR 300 QASSSVNVAS KPQTEVQLQS GREICAADSA STPKEDRPSR DYSTPITSDK LDGSNYASWS 360 HGARITITSR R

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW  60
DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK  120
RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKNNVKNAD VATTCDEGET  180
HNASDVEYQP VNDMNMEDTR PPENGDYFER ARDLLLANSL SNNDHNAFPP EFSANDQEFL  240
RTLIVEPQFR VTSDTDREPV HHRVQSLQMR CEPQILYKLQ CGSSQSRRDT DVILHNQLSR  300
QASSSVNVAS KPQTEVQLQS GREICAADSA STPKEDRPSR DYSTPITSDK LDGSNYASWS  360
HGARITITSR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	8e-33	NAC family protein