PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001183.1_g040.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 371aa MW: 42569.4 Da PI: 6.4443 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 128.2 | 6.5e-40 | 16 | 144 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePwdL k +k ++++ +fFs+ +y+ +k+++r+t+ g+ Pav_sc0001183.1_g040.1.br 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWDLVaKsLMKPDDESGFFFSQP--EYTPKKKTKRTTEVGF 97 79****************************999**************7442444466666888876..4566889********* PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 Wk tg+++++ ++ +++++g k++L+fy g+ +++ kt+Wvmhey Pav_sc0001183.1_g040.1.br 98 WKITGREHDIRTRdrRRTVIGKKRILTFYIGQVRNSDKTNWVMHEYY 144 ***********99767778***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK 120 RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKNNVKNAD VATTCDEGET 180 HNASDVEYQP VNDMNMEDTR PPENGDYFER ARDLLLANSL SNNDHNAFPP EFSANDQEFL 240 RTLIVEPQFR VTSDTDREPV HHRVQSLQMR CEPQILYKLQ CGSSQSRRDT DVILHNQLSR 300 QASSSVNVAS KPQTEVQLQS GREICAADSA STPKEDRPSR DYSTPITSDK LDGSNYASWS 360 HGARITITSR R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 8e-33 | NAC family protein |