PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001183.1_g020.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 438aa MW: 49501.3 Da PI: 5.8295 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 127.7 | 9.1e-40 | 16 | 144 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+GfrF+Ptdeelv++yLk+kv+g ++++e +i+e+di+k+ePwdL k +k ++++ +fFs+ +y+ +k+++r+t+ g+ Pav_sc0001183.1_g020.1.br 16 LPVGFRFRPTDEELVDYYLKNKVQGMDFHAEGIIDEIDILKFEPWDLVaKsLMKPDDESGFFFSQP--EYTPKKKTKRTTEVGF 97 79****************************999**************7442444466666888876..4566889********* PP NAM 83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 Wk tg+++++ ++ +++++g k++L+fy g+ +++ kt+Wvmhey Pav_sc0001183.1_g020.1.br 98 WKITGREHDIRTRdrRRTVIGKKRILTFYIGQVRNSDKTNWVMHEYY 144 ***********99767778***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MISFSRAAAE GGDLTLPVGF RFRPTDEELV DYYLKNKVQG MDFHAEGIID EIDILKFEPW 60 DLVAKSLMKP DDESGFFFSQ PEYTPKKKTK RTTEVGFWKI TGREHDIRTR DRRRTVIGKK 120 RILTFYIGQV RNSDKTNWVM HEYYIPKAHP NANQRDFVLC HLKKNVKNSG EIHTDVATTC 180 DEVEPSTHNE SDFENPPAHD MIDILEEYVD YNALQTAFVA NDSDAEFAEF LETVLVEPDG 240 GVTSDTDMEP FHGHVQTEMD RGVFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPETDR 300 VQLKSDASQG AQGPRHLSGP IIDTSADEYY TKEKTRRRTY PPAKPKQPAY RGTAADLPQK 360 QISVTNSSQD KKVAQGKNAE KGMEQTQNRT TVSNWKGSFI TWQTSPLTTS PPSVYISNIF 420 LGLFLLYSCV REVVLYGE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 6e-32 | NAC family protein |